Hvidsten research group

Posters and abstracts

Peer-reviewedOther publicationsPosters & abstractsPresentationsPress releases

Posters and abstracts

  1. [104] D. E. R. Calderon, A. V-P. León, T. R. Hvidsten, S. R. Sandve, P. Pope and S. L. La Rosa. Decrypting Microbial Mechanisms Supporting Symbiosis in the Atlantic Salmon Gut. Trends in Marine Host-Microbe Symbioses Symposium, October 21, 2025.
  2. [103] M. Paliocha, A. C. Hjertaas, T. R. Hvidsten, R. S. Sobral, C. P. Osborne, K. J. Simpson, J. C. Preston and S. Fjellheim. Uncovering transcriptional convergence underlying parallel evolution of annuality in Pooideae. International Brachypodium Research Conference 2025, Monte Verità, July 5, 2025.
  3. [102] V. T. E. Aho, C. M. Kobel, A. Leu, A. V-P. León, O. Øyås, W. Lai, I. Altshuler, L. H. Hagen, R. Wollenberg, C. Bakshani, W. Willats, L. N. Calin, S. J. McIlroy, T. R. Hvidsten, C. Greening, G. Tyson, R. Roehe and P. Pope. Metaproteomics as a contributor to understanding rumen microbiome patterns. International metaproteomics symposium, Oslo, January 13, 2025.
  4. [101] A. V-P. León, M. Hötzinger, T. Hensen, S. Gupta, B. Weston, S. Johnsen, J. A. Rasmussen, C. G. Clausen, L. Pless, A. Verissimo, K. Rudi, L. Snipen, C. R. Karlsen, M. T. Limborg, S. Bertilsson, I. Thiele, T. R. Hvidsten, S. R. Sandve, P. Pope and S. L. La Rosa. A mechanistic dive into the salmon gut microbiome through integration of cultivation and multi-omics. Norwegian Society for Microbiology Annual Meeting, Ås, October 22, 2024.
  5. [100] P. Bhattacharjee, M. T. Syvertsen, I. Yakovlev, T. R. Hvidsten, T. Tengs, M. R. Kovi, M. Viejo, C. G. Fossdal and J. E. Olsen. Deciphering annual growth-dormancy cycle in Norway spruce (Picea abies): The dynamic changes in physiology shaped by environmental cues. SPPS 2024, Copenhagen, Denmark, August 27, 2024.
  6. [99] A. V-P. León, M. Hötzinger, T. Hensen, S. Gupta, B. Weston, S. Johnsen, J. A. Rasmussen, C. G. Clausen, L. Pless, A. Verissimo, K. Rudi, L. Snipen, C. R. Karlsen, M. T. Limborg, S. Bertilsson, I. Thiele, T. R. Hvidsten, S. R. Sandve, P. Pope and S. L. La Rosa. A mechanistic dive into the salmon gut microbiome through integration of cultivation, omics and metabolic modelling. 19th International Symposium on Microbial Ecology, Cape Town, August 18, 2024.
  7. [98] P. Bhattacharjee, D. Blagojevic, Y. K. Lee, G. B. Gillard, L. Grønvold, T. R. Hvidsten, S. R. Sandve, O. C. Lind, B. Salbu, D. A. Brede and J. E. Olsen. Deciphering differential radiosensitivity plants: radiosensitive Norway spruce (Picea abies) showed less efficient mobilization of protection and repair than in radiotolerant A. thaliana in gamma radiation exposure. Plant Biology 2024, Honolulu, Hawaii, USA, June 22, 2024.
  8. [97] C. M. Kobel, V. T. E. Aho, A. V-P. León, O. Øyås, L. Nicoll, G. Tyson, I. Altshuler, T. R. Hvidsten, R. Roehe and P. Pope. Holo-omic Workflow Utilizing Network Analysis Reveals Compositional Bistability Between Rumen Microbiomes. Applied HoloGenomics Conference 2024, Copenhagen, Denmark, June 30, 2024.
  9. [96] J. E. Olsen, I. Yakovlev, M. Viejo, M. T. Syvertsen, P. Bhattacharjee, M. R. Kovi, T. Tengs, T. R. Hvidsten and C. G. Fossdal. How is epigenetic memory induced in embryos and maintained year after year in long-lived plants? (EpiMemo). Plant Epigenetic Memory and Phenotypic Plasticity Seminar, Landvik, June 6, 2024.
  10. [95] M. Paliocha, A. C. Hjertaas, R. S. Sobral, T. R. Hvidsten, J. C. Preston and S. Fjellheim. Unscrambling the genetics of plant life-histories with time-series expression data. Norwegian Bioinformatics Days 2024, Bergen, May 28, 2024.
  11. [94] C. M. Kobel, V. T. E. Aho, A. V-P. León, O. Øyås, L. Nicoll, A. Leu, G. Tyson, S. J. McIlroy, I. Altshuler, T. R. Hvidsten, R. Roehe and P. Pope. Holo-omic network analysis reveals bistability in the rumen microbiom. Congress of Gastrointestinal Function, University of Illinois, USA, April 8, 2024.
  12. [93] P. Bhattacharjee, D. Blagojevic, Y. K. Lee, G. B. Gillard, L. Grønvold, T. R. Hvidsten, S. R. Sandve, O. C. Lind, B. Salbu, D. A. Brede and J. E. Olsen. Inefficient mobilization of protection and repair pathways during gamma radiation exposure leads to radiosensitivity in Norway spruce (Picea abies) compared to the radiotolerant Arabidopsis thaliana. Norwegian Plant Biology 2024, Oslo, Norway, Botanical gardens of the University of Oslo, March 21, 2024.
  13. [92] A. Szymik, J. Giezgała, M. Machnicka, T. R. Hvidsten and B. Wilczyński. Using CNNs and ATAC-STARR-seq to uncover predictive opportunities in regulatory genomics. Symposium of the Polish Bioinformatics Society, September 11-13, 2024,Warsaw.
  14. [91] A. V-P. León, S. Gupta, M. T. Limborg, S. R. Sandve, T. R. Hvidsten, P. Pope and S. L. La Rosa. The Salmon Microbial Genome Atlas (SMGA) enables novel insights into bacteria-fish interactions via functional mapping. 4th international fish microbiome workshop, Wageningen, September 6, 2023.
  15. [90] P. Bhattacharjee, D. Blagojevic, Y. K. Lee, G. B. Gillard, L. Grønvold, T. R. Hvidsten, S. R. Sandve, O. C. Lind, B. Salbu, D. A. Brede and J. E. Olsen. Comparative analyses of differential radiosensitivity in radiotolerant A. thaliana and radiosensitive Norway spruce (Picea abies) revealed molecular pathways associated with gamma radiation response. Plant Biology Europe 2023, Marseille, France, July 3, 2023.
  16. [89] P. Bhattacharjee, D. Blagojevic, Y. K. Lee, G. B. Gillard, L. Grønvold, T. R. Hvidsten, S. R. Sandve, O. C. Lind, B. Salbu, D. A. Brede and J. E. Olsen. Radio-sensitivity in plants: A comparative overview of differential responses to gamma radiation in radiotolerant A. thaliana and radiosensitive conifer Norway spruce (Picea abies). 5th International conference on Radioecology and Environmental Radioactivity (ICRER2022), Oslo, Norway, September 4, 2022.
  17. [88] Y. K. Lee, P. Bhattacharjee, M. Viejo, G. B. Gillard, S. R. Sandve, T. R. Hvidsten, O. C. Lind, B. Salbu, D. A. Brede and J. E. Olsen. Sensitivity to gamma radiation of embryogenic cells of the conifer Norway spruce (Picea abies). 5th International conference on radioecology and environmental radioactivity (ICRER 2022), Oslo, September 4, 2022.
  18. [87] P. Bhattacharjee, D. Blagojevic, Y. K. Lee, G. B. Gillard, L. Grønvold, T. R. Hvidsten, S. R. Sandve, O. C. Lind, B. Salbu, D. A. Brede and J. E. Olsen. Differential radio-sensitivity in plants: Why is Arabidopsis thaliana radio-tolerant compared to highly sensitive conifers? The 32nd International conference on Arabidopsis research (ICAR 2022), Belfast, July 20, 2022.
  19. [86] S. Gupta, S. Leanti La Rosa, A. V-P. León, S. R. Sandve, P. Pope, T. R. Hvidsten. Feed-microbiome-host interactions in Atlantic salmon over life stages. Applied Hologenomics Conference, September 13-15, 2022, Bilbao, Spain.
  20. [85] S. Birkeland, E. R. Soldado, K. Vandepoele, Z. Carracedo, N. R. Street, T. R. Hvidsten. What makes a tree a tree? Evolution of the gene regulatory network underlying wood formation. Congress of the European Society for Evolutionary Biology, August 14-19, 2022, Prague, Czech Republic.
  21. [84] C. M. Kobel, I. Altshuler, L. Nicoll, M. Martinez-Alvaro, R. Roehe, T. R. Hvidsten, P. Pope. Holo-omics and host-microbiome interactions in the herbivore rumen. 18th International Symposium on Microbial Ecology (ISME18), August 14-19, 2022, Lausanne, Switzerland.
  22. [83] S. Gupta, S. Leanti La Rosa, A. V-P. León, S. R. Sandve, P. Pope, T. R. Hvidsten. Feed-microbiome-host interactions in Atlantic salmon over life stages. 18th International Symposium on Microbial Ecology (ISME18), August 14-19, 2022, Lausanne, Switzerland.
  23. [82] I. Altshuler, A. V-P. León, M. Watson, C. M. Kobel, T. R. Hvidsten, R. Roehe, P. Pope. Transkingdom network analysis across the bovine rumen host-microbiome nexus reveals associations to host fitness. 18th International Symposium on Microbial Ecology (ISME18), August 14-19, 2022, Lausanne, Switzerland.
  24. [81] T. O. Andersen, I. Altshuler, A. V-P. León, J. Walter, E. McGovern, K. Keogh, C. Martin, L. Bernard, D. P. Morgavi, T. Park, J. Firkins, Z. Yu, T. R. Hvidsten, S. Waters, M. Popova, M. Ø. Arntzen, L. H. Hagen, P. Pope. The metabolic influence of the core ciliate Entodinium caudatum within the rumen microbiome. 18th International Symposium on Microbial Ecology (ISME18), August 14-19, 2022, Lausanne, Switzerland
  25. [80] P. Bhattacharjee, D. Blagojevic, Y. K. Lee, G. B. Gillard, L. Grønvold, T. R. Hvidsten, S. R. Sandve, O. C. Lind, B. Salbu, D. A. Brede and J. E. Olsen. Dynamic regulation of DNA repair genes and antioxidants in the radiotolerant Arabidopsis thaliana and radiosensitive Norway spruce (Picea abies) during gamma radiation stress. CERAD annual meeting 2022, organised by CERAD CoE (NMBU), Oslo, Norway, May 30, 2022.
  26. [79] T. O. Andersen, I. Altshuler, A. V-P. León, J. Walter, E. McGovern, K. Keogh, C. Martin, L. Bernard, D. P. Morgavi, T. Park, J. Firkins, Z. Yu, T. R. Hvidsten, S. Waters, M. Popova, M. Ø. Arntzen, L. H. Hagen, P. Pope. Genome-centric metaproteomics reveals metabolic influence of the ciliate Entodinium caudatum within the rumen microbiome. Congress on Gastrointestinal Function, April 11-13, 2022, Virtual.

  27. [78] P. Bhattacharjee, D. Blagojevic, Y. K. Lee, G. B. Gillard, L. Grønvold, T. R. Hvidsten, S. R. Sandve, O. C. Lind, B. Salbu, D. A. Brede and J. E. Olsen. Exploring differential sensitivity to gamma radiation in plants: A systematic approach using growth studies, histology, and molecular biology tools. Plant Biology Europe (PBE2021), Turin, Italy, June 28, 2021.
  28. [77] P. Bhattacharjee, D. Blagojevic, Y. K. Lee, G. B. Gillard, L. Grønvold, S. R. Sandve, T. R. Hvidsten, O. C. Lind, B. Salbu, D. A. Brede and J. E. Olsen. Comparative radiosensitivity: Efficient DNA repair contributes to gamma radiation tolerance in Arabidopsis thaliana compared to Norway spruce. CERAD annual meeting 2021, Oslo, Norway, May 11, 2021.
  29. [76] P. Bhattacharjee, Y. K. Lee, D. Blagojevic, G. B. Gillard, L. Grønvold, T. R. Hvidsten, S. R. Sandve, O. C. Lind, B. Salbu, D. A. Brede and J. E. Olsen. Molecular mechanisms behind differential radiosensitivity in plants. Annual conference CERAD, Oslo, February 10, 2020.
  30. [75] P. Bhattacharjee, D. Blagojevic, Y. K. Lee, G. B. Gillard, L. Grønvold, S. R. Sandve, T. R. Hvidsten, O. C. Lind, B. Salbu, D. A. Brede and J. E. Olsen. Exploring differential sensitivity to gamma radiation in plants: A systematic approach using growth studies, histology, and molecular biology tools. CERAD annual conference 2020, Oslo, Norway, February 11, 2020.
  31. [74] J. E. Olsen, D. Blagojevic, P. Bhattacharjee, Y. K. Lee, G. B. Gillard, L. Grønvold, T. R. Hvidsten, S. R. Sandve, O. C. Lind, D. A. Brede and B. Salbu. Altered hormone metabolism in response to low-moderate doses of gamma radiation. The 2019 International plant growth substances association conference, Paris, September 25, 2019.
  32. [73] J. E. Olsen, D. Blagojevic, P. Bhattacharjee, Y. K. Lee, G. B. Gillard, L. Grønvold, T. R. Hvidsten, S. R. Sandve, O. C. Lind, D. A. Brede and B. Salbu. Differential sensitivity to gamma radiation in different plant species across the organismal, cell and molecular level. The 2019 Scandinavian Society of Plant Physiology conference, Umeå, August 28, 2019.
  33. [72] S. R. Sandve, T. R. Hvidsten, G. B. Gillard, L. Grønvold. Gene regulatory evolution following whole genome duplication in salmonids. International Conference on Integrative Salmonid Biology,  17.-20 November 2019, The Royal College of Surgeons of Edinburgh, Scotland.
  34. [71] P. Bhattacharjee, D. Blagojevic, Y-K. Lee, M. Viejo, G. B. Gillard, L. Grønvold, T. R. Hvidsten, S. R. Sandve, O. C. Lind, B. Salbu, D. A. Brede, J. E. Olsen. Sensitivity to gamma irradiation on different developmental stages Norway spruce. 28th Congress of the Scandinavian Plant Physiology Society (SPPS), August 28-30, 2019, Umeå, Sweden.
  35. [70] M. Schubert, L. Grønvold, T. Marcussen, A. Meseguer, S. R. Sandve, T. R. Hvidsten and S. Fjellheim. Evolution of tolerance to temperate climates in the grass subfamily Pooideae. New Phytologist next generation scientist meeting, July 22-25, 2019, Dublin Irland.
  36. [69] S. R. Sandve, G. B. Gillard, L. Grønvold, R. V. Rohlfs, T. R. Hvidsten. Gene regulatory evolution following whole genome duplication. International Conference on Polyploidy, June 11-14, 2019, Ghent, Belgium.
  37. [68] B. J. Kunath, F. Delogu, A. E. Naas, M. Ø. Arntzen, V. Eijsink, T. R. Hvidsten, P. Pope. From proteins to polysaccharides; adaptations of heterogeneous strains and interactions for biomass co-degradation. 17th International Symposium on Microbial Ecology (ISME17), August 12-17, 2018, Leipzig, Germany.
  38. [67] N. Mähler, K. M. Robinson, T. R. Hvidsten and N. R. Street. Integrating genetic variation with metabolite abundance and gene expression in Populus tremula. Biology of Genomes, May 8 - 12, 2018, Cold Spring Harbor, USA.
  39. [66] M. Schubert, S. R. Sandve, L. Grønvold, T. R. Hvidsten, S. Fjellheim. Molecular evolution of cold acclimation in temperate grasses (Pooideae). Evolutionary Systems Biology, April 11-13, 2018, Wellcome Genome Campus Conference Centre, Hinxton,  UK.
  40. [65] V. Demko, T. Belova, T. R. Hvidsten, P-F. Perroud, W. Johansen and O-A Olsen. Using transcriptomics to link Calpain-controlled development to gene expression networks. Norwegian Plant Biology Conference, June 21-22, 2017, Hamar, Norway.
  41. [64] M. Schubert, L. Grønvold, S. R. Sandve, T. R. Hvidsten and S. Fjellheim. Molecular evolution of cold response in temperate grasses (Pooideae). Evolution, June 23-27, 2017, Portland, USA.
  42. [63] T. Harvey, G. Gillard, S. R.  Sandve and  T. R. Hvidsten. Diet and life-stage remodeling of lipid metabolism regulation in the duplicated Atlantic salmon genome. Evolution, June 23-27, 2017, Portland, USA.
  43. [62] G. Gillard, R. Rohlfs, T. R. Hvidsten and S. R. Sandve. Evolution of gene expression following whole genome duplication. Evolution, June 23-27, 2017, Portland, USA.
  44. [61] T. Harvey, J. S. Torgersen, J. O. Vik, T. R. Hvidsten, G. Gillard, S. R. Sandve. Precision cut liver slice culture as a platform for studying lipid metabolism in Atlantic salmon. Norwegian Biochemical Society (NBS) annual meeting. January 19-22, 2017, Gol, Norway.
  45. [60] G. Gillard, T. Harvey, J. O. Vik, A. B. Gjuvsland, S. Lien, T. R. Hvidsten and S. R.  Sandve. Metabolic responses in Atlantic salmon omega-3 pathways after dietary switches between fish and vegetable oils. International Conference on Integrative Salmonid Biology (ICISB). April 24-27, 2016, Puerto Varas, Chile.
  46. [59] G. Gillard, S. R. Sandve and T. R. Hvidsten. Salmonid gene expression evolution after whole genome duplication. Bay Area Population Genomics Meeting XIV. September 17, 2016, San Francisco State University, USA.
  47. [58] N. Mähler, K. M. Robinson, N. R. Street and T. R. Hvidsten. The regulatory landscape of Populus tremula. RegGenSIG at ISMB. July 10-14, 2015, Dublin, Ireland.
  48. [57] B. K. Terebieniec, B. Schiffthaler, K. M. Robinson, N. Mähler, N. Delhomme, T. R. Hvidsten and N. R. Street. Leaf Development Characterisation in European Aspen (Populus tremula). IUFRO Tree Biotechnology Conference. June 8-12, 2015, Florence, Italy.
  49. [56] R. Zaborowski, T. R. Hvidsten and B. Wilczyński. Genes co-localization in topologically associating domains indicates higher co-expression. Recomb. April 12-15, 2015, Warsaw, Polen.
  50. [55] M. Schubert, S. R. Sandve, L. Grønvold, T. R. Hvidsten and S. Fjellheim. Evolution of vernalization and daylength response in the grass subfamily Pooideae as an adaptation to seasonal and cool climates. ForBio Annual Meeting 2014, Tromsø, February 24, 2014.
  51. [54] M. Schubert, S. R. Sandve, L. Grønvold, T. R. Hvidsten and S. Fjellheim. Evolution of vernalization and daylength response in the grass subfamily Pooideae as an adaptation to seasonal and cool climates. Genetic Resources for Food and Agriculture in a Changing Climate, Lillehammer, January 27, 2014.
  52. [53] M. Schubert, L. Grønvold, S. R. Sandve, T. R. Hvidsten and S. Fjellheim. Evolution of vernalization in the grass subfamily Pooideae – an integrated approach. Plant Genomics Congress. May 12-13, 2014, London, UK.
  53. [52] M. Pfeifer, K. G. Kugler, S. R. Sandve, B. Zhan, H. Rudi, T. R. Hvidsten, E. Paux, International Wheat Genome Sequencing Consortium, K. Mayer, O.-A. Olsen. The Transcriptional Landscape of Bread Wheat. Plant & Animal Genome XXII Conference. January 11-15, 2014, San Diego, USA.
  54. [51] S. Netotea, D. Sundell, N. Mähler, N. Delhomme, N. R. Street, T. R. Hvidsten. Comparative Analysis of Gene Regulatory Networks in Plants. Plant & Animal Genome XXII Conference. January 11-15, 2014, San Diego, USA.
  55. [50] N. Delhomme, C. Mannapperuma, D. Sundell, N. Mähler, B. Schiffthaler, Y-C. Lin, J. Felten, M. G. Grabherr, Y. Van de Peer, S. Jansson, B. Sundberg, T. R. Hvidsten and N. R. Street. A Cautionary Tale of Using RNAseq Data: Examples from Large-Scale Projects at the Umeå Plant Science Centre. Plant & Animal Genome XXII Conference. January 11-15, 2014, San Diego, USA.
  56. [49] N. Mähler, S. Netotea and T. R. Hvidsten. Synergy: A Web Resource for Exploring Gene Expression in Synechocystis sp. PCC6803. Plant & Animal Genome XXII Conference. January 11-15, 2014, San Diego, USA.
  57. [48] D. Sundell, S. Netotea, T. R. Hvidsten and N. R. Street. PlantGenIE - the Plant Genome Integrative Explorer. Plant & Animal Genome XXII Conference. January 11-15, 2014, San Diego, USA.
  58. [47] S. Netotea, D. Sundell, N. R. Street and T. R. Hvidsten. ComPlEx: A tool for studying conservation and divergence of co-expression networks in A. thaliana, Populus, O. sativa. Plant Genomics Congress. May 13-14, 2013, London, UK.
  59. [46] B. Nystedt*, N. R. Street*, A. Wetterbom, A. Zuccolo, Y-C. Lin, D. G. Scofield, F. Vezzi, N. Delhomme, S. Giacomello, A. Alexeyenko, R. Vicedomini, K. Sahlin, E. Sherwood, M. Elfstand, L. Gramzow, K. Holmberg, J. Hällman, O. Keech, L. Klasson, M. Koriabine, M. Kucukoglu, M. Käller, J. Luthman, F. Lysholm, T. Niittylä, Å. Olson, N. Rilakovic, C. Ritland, J. A. Rosselló, J. Sena, T. Svensson, C. Talavera-López, G. Theißen, H. Tuominen, K. Vanneste, Z-Q. Wu, B. Zhang, P. Zerbe, L. Arvestad, R. Bhalerao, J. Bohlmann, J. Bousquet, R. Garcia-Gil, T. R. Hvidsten, P. de Jong, J. MacKay, M. Morgante, K. Ritland, B. Sundberg, S. L. Thompson, Y. Van de Peer, B. Andersson, O. Nilsson, P. K. Ingvarsson, J. Lundeberg and S. Jansson. Evolutionary insights into gymnosperm genomes resulting from the Norway spruce genome project. May 25-31, 2013, IUFRO Tree Biotechnology, Ashville, USA.
  60. [45] K. M. Robinson, N. Delhomme, J. Önskog, A. Olsson, P. Ingvarsson, B. Albrectsen, S. Jansson, T. R. Hvidsten, N. R. Street1. Sex: It’s Complicated. UPSC days. October, 2012, Umeå, Sweden.
  61. [44] T. R Hvidsten. The systems biology of aspen wood development. International Conference on Metabolomics & Systems Biology. February 20-22, 2012, San Francisco, USA.
  62. [43] N. Street, T. R. Hvidsten, B. Sundberg, Y-C. Lin, S. Netotea and Stefan Jansson. Large-scale RNA-Seq transcriptomics studies exploring wood development and natural variation in aspen (P. tremula): projects and resource development. Plant and Animal Genome XX Conference. January 14-18, 2012, San Diego, USA.
  63. [42] V. Srivastava, O. Obudulu, J. Bygdell, P. Ryden, R. Nilsson, P. Jonsson, E. Freyhult, J. Quarnström, J. Karlsson,  T. Moritz, T. R. Hvidsten, J. Trygg and G. Wingsle. A systems biology approach to studying global response to oxidative stress in Populus. Metabomeeting 2011, September 25-28, Helsinki, Finland.
  64. [41] S. Netotea, F. Richard and T. R. Hvidsten. Modeling adaptive changes in Populus metabolic and transcriptional networks. 1st Conference on Constraint-based Reconstruction and Analysis (COBRA), June 24-26, 2011, Reykjavik, Iceland.
  65. [40] F. Lysholm, P. Björkholm, T. R. Hvidsten and B. Persson. Residue-residue contact prediction through matching of known motifs. Critical Assessment of Techniques for Protein Structure Prediction (CASP9), December 5-9, 2010, Asilomar Conference Center, Pacific Grove, CA, USA.
  66. [39] P. Björkholm, F. Lysholm, A. Kryshtafovych, K. Fidelis, and T. R. Hvidsten. FragHMMent – Contact prediction using hidden Markov models trained on alignments of local descriptors of protein structure. Critical Assessment of Techniques for Protein Structure Prediction (CASP9), December 5-9, 2010, Asilomar Conference Center, Pacific Grove, CA, USA.
  67. [38] S. Netotea and T. R. Hvidsten. Inferring gene regulatory networks to identify conserved regulation between Arabidopsis and Populus. ECCB, Sep 26 - Sep 29, 2010, Ghent, Belgium.
  68. [37] P. Björkholm, P. Daniluk, A. Kryshtafovych, K. Fidelis, R. Andersson and T. R. Hvidsten. FragHMMent: Using multi-data hidden Markov models trained on local neighborhoods of protein structure to predict residue-residue contacts. ISMB and ECCB, June 27-July 2, 2009, Stockholm, Sweden.
  69. [36] B. Dedicova, T. R. Hvidsten, O. Nilsson, U.  Egertsdotter. Cryopreservation and survival ability of different Elite embryogenic lines of Norway spruce. 1st International Symposium on Cryopreservation in Horticultural Species, April 5-8, 2009, Leuven, Belgium.
  70. [35] N. Street, S. Jansson and T. R. Hvidsten. A systems biology approach to model the transcriptional network in trees. UPSC meeting: Future directions in plant research, March 16-18, 2009, Gålsjö bruk, Sweden.
  71. [34] P. Björkholm, P. Daniluk, A. Kryshtafovych, K. Fidelis, R. Andersson and T. R. Hvidsten. Predicting residue-residue contacts using hidden Markov models trained on local neighborhoods of protein structure. Critical Assessment of Techniques for Protein Structure Prediction (CASP8), December 3-7, 2008, Cagliari, Sardinia, Italy.
  72. [33] J. E. S. Wikberg, M. Eklund, O. Spjuth, H. Strömbergsson, T. R. Hvidsten and M. Lapins. Proteochemometrics. 17th European Symposium on QSAR in ”omics” and Systems biology, September 21-26, 2008, Uppsala, Sweden.
  73. [32] P. Björkholm og T. R. Hvidsten. Method for recognizing local descriptors of protein structure using Hidden Markov Models. 8th Swedish Bioinformatics Workshop for Ph.D. Students and Postdocs, February 28-29th, 2008, Uppsala, Sweden.
  74. [31] H. Strömbergsson, T. R. Hvidsten, J. E. S. Wikberg, A. Kryshtafovych, P. Daniluk, K. Fidelis and G. J. Kelywegt. Enzyme Wide Modeling of Protein-Ligand Interactions. ISMB/ECCB: 3DSIG: The 3rd Structural Bioinformatics and Computational Biophysics Satellite Meeting, pp. 62, 19-20 July, 2007, Vienna, Austria.
  75. [30] T. R. Hvidsten, A. Kryshtafovych, P. Daniluk, K. Fidelis and J. Komorowski. Prediction of protein function using local descriptors of protein structure. Critical Assessment of Techniques for Protein Structure Prediction (CASP7), November 26-30, 2006, Asilomar Conference Center, Pacific Grove, CA, USA.
  76. [29] H. Strömbergsson and T. R. Hvidsten. Generalized modeling of enzyme-ligand interactions using proteochemometrics and local protein substructures. Tenth Annual Conference of the Swedish Structural Biology Network, 16-19 June, 2006, Tällberg, Sweden.
  77. [28] T. R. Hvidsten, B. Wilczyński, A. Kryshtafovych, J. Tiuryn, J. Komorowski and K. Fidelis. Learning regulatory binding site modules from sequence and expression data. Tenth Annual International Conference on Research in Computational Molecular Biology (RECOMB), April 2-5, 2006, Venice, Italy.
  78. [27] U. Bergström, J. A. Olsson, T. R. Hvidsten, J. Komorowski, J. Brandt. Altered Gene Expression in the Olfactory Bulb Following Exposure to 2,6-Dichlorophenyl Methylsulfone. Eurotox: The 42nd Congress of the European Societies of Toxicology, September 11-14, 2005, Cracow, Poland.
  79. [26] J. L. Dennis, T. R. Hvidsten, E. C. Wit, J. Komorowski, A. K. Bell, I. Downie, J. Mooney, C. Verbeke, C. Bellamy, W. N. Keith, K. A. Oien. Markers of adenocarcinoma characteristic of the site of origin - Development of a diagnostic algorithm. 187th Meeting of the Pathological-Society-of-Great-Britain-and-Ireland, January 6-7, 2005, London, England.
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  81. [24] T. R. Hvidsten, A. Kryshtafovych, P. Daniluk, K. Fidelis, J. Komorowski. Predicting function from local substructures of proteins. 5th Swedish Bioinformatics Workshop for Ph.D. Students and Postdocs, November 26-27th, 2004, Lund, Sweden.
  82. [23] R. Andersson, J. Vesterlund, T. R. Hvidsten and J. Komorowski. Genomic Rosetta: a toolkit for functional genomics. 5th Swedish Bioinformatics Workshop for Ph.D. Students and Postdocs, November 26-27th, 2004, Lund, Sweden.
  83. [22] A. Johansson, H. Midelfart, T. R. Hvidsten and J. Komorowski. A Rough Set approach to functional classification of genes using a combination of heterogeneous data sources, Bioinformatics 2004, June 3-6, Linköping, Sweden.
  84. [21] P. Daniluk, A. Kryshtafovych, T. R. Hvidsten, J. Komorowski and K. Fidelis. Identifying structural similarity of proteins using local descriptors of protein structure, Pacific Symposium on Biocomputing 2004, Hawaii, USA.
  85. [20] B. Wilczyński, T. R. Hvidsten, A. Kryshtafovych, J. Komorowski and K. Fidelis. An iterative approach to gene regulation pathways discovery, Pacific Symposium on Biocomputing 2004, Hawaii, USA.
  86. [19] A. Kryshtafovych, T. R. Hvidsten, J. Komorowski, K. Fidelis. Fold Recognition Using Sequence Fingerprints of Protein Local Substructures. CSB 2003, 517-518, Stanford, 11-14. August, 2003.
  87. Wilczyński, T.R. Hvidsten, A. Kryshtafovych, L. Stubbs, J. Komorowski, K. Fidelis. A rule-based framework for gene regulation pathways discovery. CSB 2003, 517-518, Stanford, 11-14. August, 2003.
  88. [18] T. R. Hvidsten, A. Kryshtafovych, K. Fidelis and J. Komorowski. A novel approach to fold recognition using sequence-derived properties from sets of structurally similar local fragments of proteins, Bioinformatics 2003, May 22-24, Helsinki, Finland.
  89. [17] Wilczyński, T. R. Hvidsten, A. Kryshtafovych, L. Stubbs, J. Komorowski and K. Fidelis. Identifying Gene Regulation Mechanisms based on Local Gene Expression Similarities using Rule Based Classifiers, in Currents in Computational Molecular Biology - RECOMB 2003, edited by R. Spang, P. Beziat and M. Vingron, pp. 293, April 10-13, 2003, Berlin, Germany.
  90. [16] T. R. Hvidsten, A. Kryshtafovych, J. Komorowski and K. Fidelis. Applying sequence-derived features from similar 3-D local structures to protein fold recognition, in Currents in Computational Molecular Biology - RECOMB 2003, edited by R. Spang, P. Beziat and M. Vingron, pp. 191-192, April 10-13, 2003, Berlin, Germany.
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  92. [14] T. R. Hvidsten, A. Kryshtafovych, J. Komorowski and K. Fidelis. Identifying gene regulation mechanisms using rule based classifiers, Pacific Symposium on Biocomputing 2003, Hawaii, USA.
  93. [13] T. R. Hvidsten. Protein fold prediction using sequence based features from local structures, 3rd Annual Workshop in Bioinformatics for PhD Students and PostDocs, November 22-23, 2002, Stockholm, Sweden.
  94. [12] T. R. Hvidsten, A. Kryshtafovych, A. Zemla, R. Vemuri, J. Komorowski and K. Fidelis. Applying sequence derived feature templates based on 3-D local structures to protein fold recognition, Bioinformatics 2002, April 4-7, Bergen, Norway.
  95. [11] H. Midelfart, W. Kusnierczyk, T. R. Hvidsten, A. Lægreid and J. Komorowski. Learning Yeast Gene Function from Expression Programs and Gene Ontology, in Conference Proceedings of the Norwegian Biochemical Society’s Wintermeeting, pp. 63, January 17-20, 2002, Røros, Norway.
  96. [10] T. R. Hvidsten, A. K. Sandvik, H. Midelfart, A. Lægreid and J. Komorowski. A method based on rough set supervised learning used to predict the biological function of unknown genes from DNA microarray gene expression data, in Conference Proceedings of the Third International Meeting on Microarray Data Standards, Annotations, Ontologies and Databases, pp. 167, Mars 28-30, 2001, Stanford University, Palo Alto, USA.
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  98. [8] J. Komorowski, A. Lægreid, T. R. Hvidsten, T.-K. Jenssen, A. K. Sandvik and D. Tjeldvoll. A methodology and tools for knowledge discovery from gene expressions, Bioinformatics 2000, Denmark.
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  100. [6] T. R. Hvidsten, T.-K. Jenssen, J. Komorowski, A. Lægreid, A. K. Sandvik and D. Tjeldvoll. Template-based gene expression analysis, in Currents in Computational Molecular Biology - RECOMB 2000, edited by S. Miyano, R. Shamir and T. Takagi, pp. 10-11, ISBN 4-946443-61-4, Universal Academy Press, Inc, April 8-11, 2000, Tokyo, Japan.
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  102. [4] C. M. Kobel, I. Altshuler, L. Nicoll, M. Martinez-Alvaro, R. Roehe, T. R. Hvidsten, P. Pope. Holo-omics and host-microbiome interactions in the herbivore rumen. Australian Microbial Ecology Conference (AusME2022), November 7-9, Melbourne.
  103. [3] T. O. Andersen, I. Altshuler, A. V-P. León, J. Walter, E. McGovern, K. Keogh, C. Martin, L. Bernard, D. P. Morgavi, T. Park, J. Firkins, Z. Yu, T. R. Hvidsten, S. Waters, M. Popova, M. Ø. Arntzen, L. H. Hagen, P. Pope. The metabolic influence of the core ciliate Entodinium caudatum within the rumen microbiome. Australian Microbial Ecology Conference (AusME2022), November 7-9, Melbourne.
  104. [2] Ø. Monsen, L. Grønvold, A. Datsomor, J. Kijas, A. Shu, T. R. Hvidsten, S. R. Sandve. Transposable elements and evolution of cis-regulaory landscape after whole genome duplication.
  105. 8th Meeting of the European Society for Evolutionary Developmental Biology, May 31-June 3, 2022, Napoli, Italy.
  106. [1] T. O. Andersen, I. Altshuler, A. V. P. de Leon, L. Bernard, H. Fougere, D. P.  Morvagi, J. F. Firkins, Z. Yu, T. R. Hvidsten, M. Popova, M. Ø. Arntzen, L. H. Hagen, P. Pope. Exploring protozoal function and their greater metabolic influence in the rumen microbiome using (meta)genome-resol   ved metaproteomics. The International Metaproteomics Symposium (IMS2021), September 28-30, Luxembourg.